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Practical BioGrids

Fri, 2007-07-06 17:12 — Duncan

Recycle or Globus Toolkit?
If you're the kind of bioinformatician who is interested in using Grid or Web Services, then the Practical High Throughput Computing for Bioinformatics course held at Imperial College London, on the 16th to 20th July, would probably be worth attending.


AAAI: Dude, Where's My Service?

Fri, 2006-07-21 18:48 — Duncan
Goglo

As the number of bioinformatics services on the web increases, finding a tool or database that performs the task you require can be problematic. At the AAAI poster session on Wednesday, I presented our paper describing a novel solution to this problem. It uses a reasoner to “intelligently” search for web services, by semantically matching service requests with advertisements and has some advantages over comparable solutions...


Debugging Web Services

Fri, 2006-06-02 21:06 — Duncan

IMGP4014There are a growing number of biomedical services out there on Wild Wild Web for performing various computations on DNA, RNA and proteins as well as the associated scientific literature. Currently, using and debugging these services can be hard work. SOAP UI (SOAP User Interface) is newish and handy free tool to help debug services and get your in silico experiments and analyses done, hopefully more easily.


Dub Dub Dub '06

Wed, 2006-05-24 18:54 — Duncan

The 15th International World Wide Web conference is currently underway in Edinburgh, Bonny Scotland. As usual, this popular conference has some good papers, only 11%* of submissions are accepted. One particular paper caught my eye:


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